Adapters

Biobb_adapters is the BioBB module collection to use the BioExcel Building Blocks with several workflow managers.

CWL

https://github.com/bioexcel/biobb_template/tree/master/biobb_template/adapters/cwl

This folder contains the Common Workflow Language template and all the data needed for testing purposes.

These CWL files are automatically generated with the CWL Generator Tool of the utils_biobb package.

PyCOMPSs

https://github.com/bioexcel/biobb_template/tree/master/biobb_template/adapters/pycompss

This folder contains the PyCOMPSs template.